PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_069100_rxsx.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 202aa    MW: 22528 Da    PI: 9.7617
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_069100_rxsx.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.2e-12249454
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                        +h ++Er+RR+++N+ +  Lr+l P+    + kK + a+i   +ve+Ik+L
  Bv3_069100_rxsx.t1  2 SHIAVERNRRKQMNDNLKVLRSLTPSF---YIKKGDQASIIGGVVEFIKEL 49
                        89************************9...9******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.5E-15166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.79E-11154No hitNo description
PROSITE profilePS5088814.227149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-12261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.5E-9249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-8455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550212.79E-5122186No hitNo description
PROSITE profilePS516719.178125202IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0009913Biological Processepidermal cell differentiation
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MSHIAVERNR RKQMNDNLKV LRSLTPSFYI KKGDQASIIG GVVEFIKELH QVLQSLESQK  60
RRKSLSPSPG SGPSPKQLQP SPRQLANANI ITNHSFQFDG GKELVASCNS PVADVEAKIS  120
GSNVVLRVIS KKIRGQLLRI ISVLEKLSFD IIHLNISSMD DTFLYYFVVK IGLECELSME  180
ELAAEVQRSF CTINTISNIT EK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010693896.11e-147PREDICTED: transcription factor MUTE
SwissprotQ9M8K62e-81MUTE_ARATH; Transcription factor MUTE
TrEMBLA0A0J8E6A61e-147A0A0J8E6A6_BETVU; Uncharacterized protein
STRINGSolyc01g080050.2.15e-90(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-77bHLH family protein